PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.P6RTW
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 118aa    MW: 13595.4 Da    PI: 8.4697
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.P6RTWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.62.1e-17751152160
                  -EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY  21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                  +r+YY+C+   gCp++k+ver+ e+p+++++tYegeHnh+k
  Araip.P6RTW  75 ARGYYKCSNMrGCPARKHVERCLEEPSMLIVTYEGEHNHPK 115
                  79******988****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031065.9E-1572114IPR003657WRKY domain
SMARTSM007744.3E-1173115IPR003657WRKY domain
SuperFamilySSF1182902.48E-1474115IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.0E-1874115IPR003657WRKY domain
PROSITE profilePS5081117.33976116IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
ESSKYQYHEQ LWDSPFSHAL PNCLKPTAKY KGSQGFDRYL TVRSNGGLNQ MQTGVSDNLL  60
YCKVLIEERE AHLKARGYYK CSNMRGCPAR KHVERCLEEP SMLIVTYEGE HNHPKLST
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.P6RTW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753521e-33EU375352.1 Glycine max transcription factor (WRKY22) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020971665.12e-32uncharacterized protein At1g04910-like isoform X1
RefseqXP_020971667.18e-33uncharacterized protein At1g04910-like isoform X3
RefseqXP_020971668.18e-33uncharacterized protein At1g04910-like isoform X4
RefseqXP_029146265.12e-32O-fucosyltransferase 38-like isoform X1
RefseqXP_029146266.12e-32O-fucosyltransferase 38-like isoform X2
RefseqXP_029146267.18e-33O-fucosyltransferase 38-like isoform X3
TrEMBLA0A445B5671e-26A0A445B567_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26373479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.15e-23WRKY DNA-binding protein 21