PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.NAY2X
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 374aa    MW: 42248.8 Da    PI: 8.6842
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.NAY2XgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.00116283223
                 EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                 +C+ Cgk Fs+   L  H r H
  Araip.NAY2X 62 ECEFCGKKFSSGKALGGHKRFH 83
                 5**************9999988 PP

2zf-C2H214.10.00014306328123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C++ F +  +L+ H ++H
  Araip.NAY2X 306 FQCNICDEYFATFQSLRGHRSNH 328
                  89******************999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.1186183IPR007087Zinc finger, C2H2
SMARTSM003551.26183IPR015880Zinc finger, C2H2-like
PfamPF139122.9E-66184IPR007087Zinc finger, C2H2
PROSITE patternPS0002806383IPR007087Zinc finger, C2H2
SuperFamilySSF576674.25E-9126149No hitNo description
PROSITE profilePS5015710.118127154IPR007087Zinc finger, C2H2
SMARTSM003550.21127149IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280129149IPR007087Zinc finger, C2H2
PfamPF139126.0E-5129150IPR007087Zinc finger, C2H2
SuperFamilySSF576674.25E-9301328No hitNo description
Gene3DG3DSA:3.30.160.608.4E-4303332IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.042306328IPR015880Zinc finger, C2H2-like
PfamPF139128.7E-7306330IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.177306333IPR007087Zinc finger, C2H2
PROSITE patternPS000280308328IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MTVKKFSFSF HCRRYNHTSS IIIKTILKAI EFQPDEPVMK KSFKLIDSMD TNEKPVTPPM  60
RECEFCGKKF SSGKALGGHK RFHLQLLRKE RESANKLAVT SDNYGGGNDR GSNIKLLSSL  120
DSPNKKLLCC LCNKEFLSEK SLFGHMRSHP GREWKGIHPP NDDDDNGLME PAVVSPIPSL  180
SSPSIDISKS LPPSWLKTGI RGKKGIFDEI LGGVVAIMVD KSHENNKSSF DLQSRAKIEH  240
DYGDREKEKE GDLVKEGCNL KKRKRILSNN MNDEITTNKK NTKLIVRLKT RPQCEEDDGS  300
SAEKGFQCNI CDEYFATFQS LRGHRSNHNK EKKSKSHKDL ENTTEESSEP SSKILREFDL  360
NELPENNNIE DGGS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.NAY2X
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016191502.10.0uncharacterized protein LOC107632321
RefseqXP_025637016.10.0uncharacterized protein LOC112732487
TrEMBLA0A445C4960.0A0A445C496_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97372437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26940.16e-16C2H2 family protein