PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.MZ01X
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 364aa    MW: 40706.9 Da    PI: 10.2291
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.MZ01XgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31298356360
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                  D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+k
  Araip.MZ01X 298 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHPK 356
                  99***********************9988****************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.9E-16254294IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.4E-33284356IPR003657WRKY domain
PROSITE profilePS5081129.998291357IPR003657WRKY domain
SuperFamilySSF1182904.18E-27294356IPR003657WRKY domain
SMARTSM007741.4E-38296356IPR003657WRKY domain
PfamPF031063.1E-27298355IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MEEVEEANRA AVESCHRVLT VLSQPQDQVH YRNLMVETGE AVVRFKKVVS LLSNSLGHAR  60
VRKHKKLQVP FSQSILLDSP ICTRKKHQSK YLKFPQADFH DNSAQELGLT VGKSLSLVAK  120
PALELSSNGN GNGKSPLQLA QQLSSTHYHI LQQQQQQQRA LLLHHQQQQQ QMKHQAEIMY  180
RRNNINNSNN CSSNNNSVIN LNFDNSSSCT PTMSSTRSFI SSLSIDGSVA NVEGSAFHLI  240
GAARSSDQNS QQHKRKCSAR GDEASGGKCH CSKKRKHRVK RSIKVPAISN KLADIPPDDY  300
SWRKYGQKPI KGSPHPRGYY KCSSMRGCPA RKHVERCLEE PSMLIVTYEG EHNHPKLSTQ  360
SANA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-19289354771WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253275KRKCSARGDEASGGKCHCSKKRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.MZ01X
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753521e-132EU375352.1 Glycine max transcription factor (WRKY22) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016204721.10.0probable WRKY transcription factor 21
RefseqXP_025658462.10.0probable WRKY transcription factor 21
SwissprotO043361e-117WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A445CKA50.0A0A445CKA5_ARAHY; Uncharacterized protein
STRINGGLYMA02G15920.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26373479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.18e-78WRKY DNA-binding protein 21