PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.DWZ32
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 277aa    MW: 30960.7 Da    PI: 8.1844
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.DWZ32genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.0012426123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ C+++F +   L  H++ H
  Araip.DWZ32  4 HRCKLCSRTFANGRALGGHMKAH 26
                 79******************998 PP

2zf-C2H217.41.3e-05177198223
                  EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                  +C +Cgk+F+++  L +H + +
  Araip.DWZ32 177 QCDKCGKTFRSSGALGSHRSIC 198
                  8*****************9876 PP

3zf-C2H214.97.9e-05210232123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++Cp+C+k+F +   L  H r+H
  Araip.DWZ32 210 FQCPYCSKVFGSGQALGGHKRSH 232
                  89**************9999999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.5E-7327IPR007087Zinc finger, C2H2
SMARTSM003550.042426IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.637431IPR007087Zinc finger, C2H2
PROSITE patternPS000280626IPR007087Zinc finger, C2H2
SMARTSM0035529176196IPR015880Zinc finger, C2H2-like
SuperFamilySSF576671.16E-7176232No hitNo description
PROSITE profilePS501578.85176197IPR007087Zinc finger, C2H2
PfamPF139120.0014177195IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.607.8E-4207232IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139122.1E-12210232IPR007087Zinc finger, C2H2
SMARTSM003550.012210232IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.221210232IPR007087Zinc finger, C2H2
PROSITE patternPS000280212232IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MERHRCKLCS RTFANGRALG GHMKAHLATL PLPPKPHQPP PQPLSFEYSS SSSSSESEHD  60
DDDDEEKDRE SETESKNKPT RTRRRSNRTR KSSIMNLTNK RTKLMSFMES PASIATEAAE  120
PVSSVSDTSP EEDLAMCLIM LSRDKWRKTS VEEEEEMKLK NKKVLRGKHH HHHHRLQCDK  180
CGKTFRSSGA LGSHRSICLC DEADGSERIF QCPYCSKVFG SGQALGGHKR SHLLPSSSSS  240
SPPSIINANL RLKQQSFIDL NLPAPPEEDD LSVLSDA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00416DAPTransfer from AT3G60580Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.DWZ32
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016202069.21e-134zinc finger protein ZAT9
RefseqXP_025653705.11e-134zinc finger protein ZAT9
TrEMBLA0A444Z8R51e-132A0A444Z8R5_ARAHY; Uncharacterized protein
STRINGXP_007155662.17e-79(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76734122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.15e-34C2H2-like zinc finger protein