PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.A0C0L
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family LBD
Protein Properties Length: 119aa    MW: 13678.9 Da    PI: 8.6412
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.A0C0LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26027.68.3e-091542128
       DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpk 28
                 +CaaC++l rkC k+C l  yfpa+++k
  Araip.A0C0L 15 PCAACRMLSRKCDKKCLLVSYFPADKAK 42
                 7***********************9976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508919.92914114IPR004883Lateral organ boundaries, LOB
PfamPF031951.3E-61542IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MDIHGVAKTE RSHQPCAACR MLSRKCDKKC LLVSYFPADK AKARLRDLVY GSSGAIFQLQ  60
KMIEELKVEL ESIRAWVFEL RQQKGHYLLM MMIHNHNYNT NTLSSSDLMA FDDSSSVHL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A151TY632e-26A0A151TY63_CAJCA; LOB domain-containing protein 11
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-14LOB domain-containing protein 1