PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.9BR1Z
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 202aa    MW: 23158.8 Da    PI: 5.0496
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.9BR1ZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.58.5e-2641161128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                  lppGf F+Ptdeel+ ++L  +++   ++   +i+++d  +++P +      ++ ++ yfF+++ k       +nr+t++gyWk+ g +++++s+  +
  Araip.9BR1Z   4 LPPGFCFSPTDEELILHFLYSRISLPFHPS--IIPDLDPSQLHPCKAF----SSGNQHYFFTNKVK-------ENRSTENGYWKEIGLSEPIISAdAN 88 
                  79*********************9877666..8***********9984....3568999**98765.......689*****************99777 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  ++ g+kk +vf     ++g++t+Wvm+ey++
  Araip.9BR1Z  89 KKLGIKKYFVFN---LNEGTETNWVMQEYHI 116
                  88*********8...788999********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-322156IPR003441NAC domain
PROSITE profilePS5100534.8644156IPR003441NAC domain
PfamPF023659.5E-205116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MTNLPPGFCF SPTDEELILH FLYSRISLPF HPSIIPDLDP SQLHPCKAFS SGNQHYFFTN  60
KVKENRSTEN GYWKEIGLSE PIISADANKK LGIKKYFVFN LNEGTETNWV MQEYHISSSM  120
FHNPISCYAN GTAHRRLLKP DQNQNNKWVL CRVYEKNKSQ SQQGATANSY YSDEDDCGSE  180
LSYLDEVYLS LDDDLEVISP PN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-20316216171NO APICAL MERISTEM PROTEIN
1ut4_B7e-20316216171NO APICAL MERISTEM PROTEIN
1ut7_A7e-20316216171NO APICAL MERISTEM PROTEIN
1ut7_B7e-20316216171NO APICAL MERISTEM PROTEIN
4dul_A7e-20316216171NAC domain-containing protein 19
4dul_B7e-20316216171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.9BR1Z
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193530.11e-149NAC domain-containing protein 104-like
RefseqXP_025637726.11e-149NAC domain-containing protein 104-like
TrEMBLA0A444ZXX91e-147A0A444ZXX9_ARAHY; Uncharacterized protein
STRINGGLYMA05G32590.29e-82(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17363395
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-50xylem NAC domain 1