PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.31EFM
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 410aa    MW: 45356.1 Da    PI: 6.1127
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.31EFMgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.12.7e-30551962128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksg 81 
                  p+G++F+P+d el+ e+L++k+   +      +  +++i++++    i++++P++Lp  +k++  +++fF+k+ ++yatg+rk+r+         ++ 
  Araip.31EFM  55 PAGVKFDPSDVELL-EHLAAKCCVGNkvphafI--QDFIPTLEgdqgICYTHPENLP-GAKKDGASVHFFHKTTNAYATGQRKRRKinhqlglsEEHV 148
                  89************.777777554443665331..334554423344**********.556778899******************8677777665589 PP

          NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                  +W++tgk+k+v++ +g ++g kk++v+y   +r  k++k++Wvmh+y+l
  Araip.31EFM 149 RWHKTGKTKAVTE-NGVHKGFKKIMVLYirPKRGAKPNKSKWVMHQYHL 196
                  9***********9.999***********7645777778*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-3639215IPR003441NAC domain
PROSITE profilePS5100529.40954215IPR003441NAC domain
PfamPF023651.1E-1255196IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MASWVIDIGG LAKKVKNNTL PLADQINDCG AYCECPICHY HIDNIDVSPE WPGFPAGVKF  60
DPSDVELLEH LAAKCCVGNK VPHAFIQDFI PTLEGDQGIC YTHPENLPGA KKDGASVHFF  120
HKTTNAYATG QRKRRKINHQ LGLSEEHVRW HKTGKTKAVT ENGVHKGFKK IMVLYIRPKR  180
GAKPNKSKWV MHQYHLGNDE GEKEGEYVVS KIFYQQKKKT KKNKLNPLVA EDSVMALQAS  240
PRTPNPNPPK RPRTGKSVDC DDNFDETDLM LFTQDGKPTI HGESLAPPPS EVHGDENNGG  300
FNNTALLSVE TQPVENSDFI GLDDILLCKE QTLDSSSAYL NDSGLKSNNL KGFACNANGN  360
AAELFGDVND CYGISVLDNL GLDSPPDFDL SNLQFCSQDN IIDLQWLDIP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.31EFM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0980154e-43BT098015.1 Soybean clone JCVI-FLGm-26B21 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020958705.10.0SUPPRESSOR OF GAMMA RESPONSE 1
RefseqXP_025653332.10.0SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBLA0A444YZ930.0A0A444YZ93_ARAHY; Uncharacterized protein
STRINGGLYMA05G09110.21e-180(Glycine max)
STRINGGLYMA19G00640.21e-180(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.14e-85NAC domain containing protein 44