PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_8447_f_3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family G2-like
Protein Properties Length: 333aa    MW: 37815.9 Da    PI: 8.1419
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_8447_f_3genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.64.7e-126589226
        G2-like  2 prlrWtpeLHerFveaveqLGGsek 26
                   prlrWtp+LH rFv+ave+LGG++ 
  Neem_8447_f_3 65 PRLRWTPDLHLRFVHAVEKLGGQDM 89
                   8*********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-1161121IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MDGSGRTEGS KTSPSNQIQQ ESESEENDEH ESNKPKNGGS SSNSTVEENE QKKPSVRPYV  60
RSKMPRLRWT PDLHLRFVHA VEKLGGQDMM ADHRHLVESG DRNIYNLSQL PMLQGYNCQS  120
HSSSFRYGDA SWSAAREYLM RSSCVSRSLI DETRPRLYGK VSQKLFDSNN SNWPTNCSFR  180
MGNSSNGANS IWKMPELKEE LLSSCMRHPW QPQSRLRPTE LNPVTQMQEQ MISSSRSTVP  240
LDSNTATNLQ ECRNSLKRKG LDCKLDLDLS LKLTTSSNEE RRRGLEDNEV VDSELSLSLY  300
SPSSSNKHSR LKEGQDRHSK ENARRASTLD LTI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006429461.11e-121putative Myb family transcription factor At1g14600
RefseqXP_006481085.11e-121putative Myb family transcription factor At1g14600
TrEMBLA0A2H5MXL01e-120A0A2H5MXL0_CITUN; Uncharacterized protein
TrEMBLV4SZQ41e-120V4SZQ4_9ROSI; Uncharacterized protein
STRINGXP_006481085.11e-121(Citrus sinensis)
STRINGXP_006429461.11e-121(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM36328184
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-32G2-like family protein