PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy016272
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 164aa    MW: 19115.3 Da    PI: 9.1835
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58450822PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind65.89.9e-2176238102
                   HHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS
  HSF_DNA-bind  38 kkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102
                   ++  p+yFkh+nf+SFvRQLn+YgFkkv  ++         weF++++F+kg k+ll++i+r+k+
     Ahy016272   7 ETFFPNYFKHNNFSSFVRQLNTYGFKKVVADR---------WEFANEYFRKGAKHLLCEIHRRKT 62 
                   56789************************999.........**********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004155.0E-15160IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.102.2E-19760IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004471.6E-17760IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467851.25E-15860IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000564.0E-9921IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000564.0E-92234IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
DLLSLPETFF PNYFKHNNFS SFVRQLNTYG FKKVVADRWE FANEYFRKGA KHLLCEIHRR  60
KTPHHHHHHH QENNNEALCW IDSSTTPTTI PSIPTSLLLP SPKSPSCSSL GGGTNSDHHH  120
HQHNHILAAL SEGNQRLRRK NLMLLSELTH MKNLYNDIIY FIQX
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds DNA of heat shock promoter elements (HSE). {ECO:0000269|PubMed:16202242}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193165.11e-110heat stress transcription factor B-4d
RefseqXP_025642025.11e-110heat stress transcription factor B-4d
SwissprotQ7XHZ01e-44HFB4B_ORYSJ; Heat stress transcription factor B-4b
TrEMBLA0A445A9C76e-94A0A445A9C7_ARAHY; Uncharacterized protein
STRINGXP_007141514.12e-58(Phaseolus vulgaris)
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]