PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy013532
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TCP
Protein Properties Length: 282aa    MW: 29980.3 Da    PI: 7.289
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59523279PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP131.48.7e-4167180289
        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 
                ++ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  ++s +ss+s+ s++            
  Ahy013532  67 TAPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTLSAPpsksaphtfhaa 166
                5679*****************************************************************9998888888888855555444444555444 PP

        TCP  89 .............k 89 
                             +
  Ahy013532 167 alalahhhpsyeeA 180
                44333333333330 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.8E-4072198IPR005333Transcription factor, TCP
PROSITE profilePS5136928.49673127IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
XNNNNNSSLV VPFDGATTAT GRPFIMGGSI SSSSSSSSSS SNSTSSSTTI DANLAIATRS  60
DDNQLQTAPK RSTKDRHTKV DGRGRRIRMP ATCAARVFQL TRELGHKSDG ETIEWLLQQA  120
EPAIIAATGT GTIPANFSTL NVSLRSSGST LSAPPSKSAP HTFHAAALAL AHHHPSYEEA  180
FHPHTALLGF HPHHAQHQHL MTADQIAEAL PGGAADSSEN YMRKRFREDL FKDESNHQSE  240
SQNNESGGTG AVAADGSSPK PFKTNLQMQL QQQQPQPEGG GX
Functional Description ? help Back to Top
Source Description
UniProtCan specifically bind site II elements in the promoter region of PP438/PNM1. {ECO:0000269|PubMed:21297037}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197271.10.0transcription factor TCP8
RefseqXP_016197274.10.0transcription factor TCP8
RefseqXP_025645646.10.0transcription factor TCP8
SwissprotQ9C5183e-63TCP8_ARATH; Transcription factor TCP8
TrEMBLA0A444ZC140.0A0A444ZC14_ARAHY; Uncharacterized protein
STRINGGLYMA12G28970.21e-101(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.11e-58TCP family protein
Publications ? help Back to Top
  1. Mazur MJ, et al.
    Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci.
    Front Plant Sci, 2017. 8: p. 2043
    [PMID:29250092]