PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy012805
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 250aa    MW: 28302.1 Da    PI: 9.4939
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58454406PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-22726PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM182.88.1e-57171431129
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                lppGfrFhPtdeel+++yL kkv ++++ + ++i evd++++ePwdLp k+k +ekewyfF+ rd+ky+tg r+nrat+sgyWkatgkdke+++ +++lv
  Ahy012805  17 LPPGFRFHPTDEELITHYLYKKVIDTNFAA-RAIGEVDLNRCEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATESGYWKATGKDKEIFR-GKSLV 114
                79*************************999.89***************888999****************************************.999** PP

        NAM 101 glkktLvfykgrapkgektdWvmheyrle 129
                g+kktLvfykgrapkgekt+Wvmhe+rle
  Ahy012805 115 GMKKTLVFYKGRAPKGEKTNWVMHEFRLE 143
                **************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-6513167IPR003441NAC domain
PROSITE profilePS5100559.67517167IPR003441NAC domain
PfamPF023651.5E-2918142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MEKVASLVLK EEEQMDLPPG FRFHPTDEEL ITHYLYKKVI DTNFAARAIG EVDLNRCEPW  60
DLPWKAKMGE KEWYFFCVRD RKYPTGLRTN RATESGYWKA TGKDKEIFRG KSLVGMKKTL  120
VFYKGRAPKG EKTNWVMHEF RLEGKFSIHN LPKTAKNEWV ICRVFRKSSA GKKVHISGIM  180
RLDTFRTELD SSGLPPLTET SPSFDTIHDE SPYVPCFSNP IDVPRNQAAG GSGGGGGVFG  240
GSFPTTPPLX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-561417314171NO APICAL MERISTEM PROTEIN
1ut4_B2e-561417314171NO APICAL MERISTEM PROTEIN
1ut7_A2e-561417314171NO APICAL MERISTEM PROTEIN
1ut7_B2e-561417314171NO APICAL MERISTEM PROTEIN
3swm_A2e-561417317174NAC domain-containing protein 19
3swm_B2e-561417317174NAC domain-containing protein 19
3swm_C2e-561417317174NAC domain-containing protein 19
3swm_D2e-561417317174NAC domain-containing protein 19
3swp_A2e-561417317174NAC domain-containing protein 19
3swp_B2e-561417317174NAC domain-containing protein 19
3swp_C2e-561417317174NAC domain-containing protein 19
3swp_D2e-561417317174NAC domain-containing protein 19
4dul_A2e-561417314171NAC domain-containing protein 19
4dul_B2e-561417314171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtBinds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016192125.10.0NAC domain-containing protein 100
SwissprotQ9FLJ21e-126NC100_ARATH; NAC domain-containing protein 100
TrEMBLV7CEG81e-142V7CEG8_PHAVU; Uncharacterized protein
STRINGXP_007155297.11e-142(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-128NAC domain containing protein 100
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]