PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy011583
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 307aa    MW: 33768.6 Da    PI: 5.4989
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59524844PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind94.31.3e-29251132102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++ ++lisw+e+g++f+v+ + efa+++LpkyFkh+nf+SF    n+YgF+kv  ++         weF+++ F++g+k ll++i+
     Ahy011583  25 FLTKTYQLVDDPSADDLISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFF---NTYGFRKVVPDR---------WEFANECFRRGEKGLLRDIQ 109
                   9***************************************************5...**********99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
     Ahy011583 110 RRKI 113
                   *985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.105.7E-3215105IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004157.4E-5121111IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467851.09E-2922111IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004478.0E-2625111IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.2E-122548IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.2E-126375IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MTPLPVEQTG ESGATESQRS IPTPFLTKTY QLVDDPSADD LISWNEDGTT FIVWRPAEFA  60
RDLLPKYFKH NNFSSFFNTY GFRKVVPDRW EFANECFRRG EKGLLRDIQR RKISPAAGDN  120
NVVTVAMAAP GRVVSPTPTN SGDEQVLSSN SSPIAPPAAA QHNNNSKNTV HRTTSCTSGP  180
ELLEENERLR KENGQMKNEL SQLRGLCNKI LALMSNYASR SSAQLLDSSA SGVAAAVVEG  240
KVALELLPEK GVPCAVDTAE AEVPKLFGVS IGMKRSRTES EAEIEREDHN QTQTQRQTQS  300
SQEPERG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A3e-222511420123Heat shock factor protein 1
5d5u_B3e-222511129129Heat shock factor protein 1
5d5v_B3e-222511129129Heat shock factor protein 1
5d5v_D3e-222511129129Heat shock factor protein 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015964451.10.0heat stress transcription factor B-2b isoform X2
RefseqXP_025700048.10.0heat stress transcription factor B-2b
SwissprotQ9T0D33e-84HFB2B_ARATH; Heat stress transcription factor B-2b
TrEMBLA0A444Z8P41e-161A0A444Z8P4_ARAHY; Uncharacterized protein
TrEMBLA0A445D6341e-161A0A445D634_ARAHY; Uncharacterized protein
STRINGGLYMA11G02800.11e-140(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.13e-72HSF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]