PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010993
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 340aa    MW: 39021.5 Da    PI: 4.9279
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58455027PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-19468PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind508.1e-1614846102
                   TT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXX CS
  HSF_DNA-bind  46 khsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkks 102
                   kh+nf+SF+RQLn+YgFkk++ e+         weF+++ F +g+ +l+++i+r+k 
     Ahy010993   1 KHNNFSSFIRQLNTYGFKKIDPEQ---------WEFSNDDFVRGQPNLMKNIHRRKP 48 
                   9*******************9998.........*********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.103.1E-15146IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004157.7E-7146IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004472.9E-13146IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467851.63E-13146IPR011991Winged helix-turn-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
KHNNFSSFIR QLNTYGFKKI DPEQWEFSND DFVRGQPNLM KNIHRRKPVH SHSLQTLHGQ  60
VAIPLTESER KSLKDDIEKL KHDKQEQILE LQRQEQEWEI FKLKIDCTKE RLETMEKRQQ  120
NMISSISQVL HKPGAALNLL TLTENMERKR RLPKGSSHFT DEASIEDPME ISQVLPSENA  180
ESSGFVTSCI ERMNQLESTL VFWEYIAQDV NETLVQSHSN LDVDESTSCP DSPALSSVQL  240
DDEVQPKSSG IDMNFEPALP FDTVALKEQP VGTTPAATGV NDKFWEQFLT ENPGSTELQE  300
AQSERMDSDN RKNEGKPSAH GKFWWNMRNV NNLPEQMGHS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146151ERKRRL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181813.10.0heat stress transcription factor A-4c
RefseqXP_016181814.10.0heat stress transcription factor A-4c
RefseqXP_025682749.10.0heat stress transcription factor A-4c
RefseqXP_025682750.10.0heat stress transcription factor A-4c
SwissprotO494032e-94HFA4A_ARATH; Heat stress transcription factor A-4a
TrEMBLA0A444WX580.0A0A444WX58_ARAHY; Uncharacterized protein
STRINGGLYMA05G29470.11e-158(Glycine max)
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]