PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010248
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NF-YA
Protein Properties Length: 327aa    MW: 35732.2 Da    PI: 8.8444
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59538419PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA93.62.3e-29151209158
  CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkp..ylheSRhkhAlrRpRgsgGrF 58 
                d p+YVNaKQy++I++RRq+Rak+  ++kl +k rkp  y+heSRh hA+rRpRg+gGrF
  Ahy010248 151 DGPIYVNAKQYHGIIRRRQSRAKAVLDNKL-TKRRKPypYMHESRHLHAMRRPRGCGGRF 209
                57****************************.888986337*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005214.6E-34149212IPR001289Nuclear transcription factor Y subunit A
PROSITE profilePS5115234.122150212IPR001289Nuclear transcription factor Y subunit A
PfamPF020453.7E-25153209IPR001289Nuclear transcription factor Y subunit A
PRINTSPR006164.2E-21153175IPR001289Nuclear transcription factor Y subunit A
PRINTSPR006164.2E-21186209IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MAKQSVYPNK EHEGIAHNSS GPWWSLFGSQ YGESCGQMKP FSLEIPNYVD QIDTGKQSAR  60
GAENISGKGH TTQFTIFPDD CKMPCGAQKP QAAISLQSPL ADTNTRFELG FNQPMICAKY  120
PYMDQIYGLF SPYGPQISGR DNAATYMASD DGPIYVNAKQ YHGIIRRRQS RAKAVLDNKL  180
TKRRKPYPYM HESRHLHAMR RPRGCGGRFL NTKNSDDQND KSGNKVIKAL GEQLQSCGSQ  240
SSEVLQSEVG TLNSSKETNG SSPNISGSEV TSMYSRGGLD SFAISHLGSA VTVHSLVDMI  300
DGGRGMNMIM PPKWVAAVGG NCCNLNA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4awl_A2e-16153216465NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165184RRRQSRAKAVLDNKLTKRRK
2165185RRRQSRAKAVLDNKLTKRRKP
3166185RRQSRAKAVLDNKLTKRRKP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025624295.10.0nuclear transcription factor Y subunit A-10 isoform X1
RefseqXP_025624296.10.0nuclear transcription factor Y subunit A-10 isoform X2
RefseqXP_025624297.10.0nuclear transcription factor Y subunit A-10 isoform X2
TrEMBLA0A445B2H40.0A0A445B2H4_ARAHY; Uncharacterized protein
STRINGXP_007162983.11e-164(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.27e-57nuclear factor Y, subunit A10