PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010138
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 289aa    MW: 33096.7 Da    PI: 9.1161
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59539834PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind44.63.8e-1414550103
                   HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXXX CS
  HSF_DNA-bind  50 faSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkkse 103
                   f+SFvRQLn+YgF+k+  ++         weF+++ Fkkg+k+ll++i+r+k++
     Ahy010138   1 FSSFVRQLNTYGFRKIVPDR---------WEFANDFFKKGEKHLLCEIHRRKTS 45 
                   79****************99.........**********************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467859.79E-11142IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.102.4E-12142IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004475.1E-11142IPR000232Heat shock factor (HSF)-type, DNA-binding
SMARTSM004152.7E-5142IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
FSSFVRQLNT YGFRKIVPDR WEFANDFFKK GEKHLLCEIH RRKTSHTHPH HQQLPSSINH  60
NQNHFNNNIH ILPSTTTFYH PFHQHNNRVS ISPDSDELPT WCDSDIISNT TTTTTTTASS  120
STLTALSQDN ERLRRSNNIL MSELAHMKKL YNDIIYFVQN HVKPVAPSNT YSSSFILPQH  180
QPSSSSATTT NCNAFSMLHK QVQQQQQQQH HDYLNSPTNT SRSSITMIED QSSKSCKTKL  240
FGVSLQSNKK RVHPDYGFSH AFAETNNKAR LVLGNDNDDY LGLNLMPPS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163103.10.0heat stress transcription factor B-4
RefseqXP_025606968.10.0heat stress transcription factor B-4-like
RefseqXP_025660367.10.0heat stress transcription factor B-4-like
SwissprotQ9C6351e-70HSFB4_ARATH; Heat stress transcription factor B-4
TrEMBLA0A445CXW60.0A0A445CXW6_ARAHY; Uncharacterized protein
STRINGAES733091e-101(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.16e-66heat shock transcription factor B4