PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy010059
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 283aa    MW: 32286.1 Da    PI: 8.1839
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59520100PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.11.3e-51131392128
        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
                ppGfrFhP+deel+v+yL++++++++l++ ++i+e+d+yk++PwdLpkk+  +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk++l++ +++ +
  Ahy010059  13 PPGFRFHPSDEELIVHYLQNRISSRPLPA-SIIAEIDLYKYNPWDLPKKALFGEEEWYFFSPRDRKYPNGLRPNRAAGSGYWKATGTDKPILTSyGSKRI 111
                9****************************.89***************8888899**************************************9988999* PP

        NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                g+kk Lvfy gr pkg+ktdW+m+eyrl
  Ahy010059 112 GVKKALVFYLGRPPKGTKTDWIMNEYRL 139
                **************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.2E-636166IPR003441NAC domain
PROSITE profilePS5100560.01712166IPR003441NAC domain
PfamPF023653.9E-2613139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MPLNASNSSY TFPPGFRFHP SDEELIVHYL QNRISSRPLP ASIIAEIDLY KYNPWDLPKK  60
ALFGEEEWYF FSPRDRKYPN GLRPNRAAGS GYWKATGTDK PILTSYGSKR IGVKKALVFY  120
LGRPPKGTKT DWIMNEYRLV DTITSPSRLK GSMRLDDWVL CRVRHKGYSS KNSCENQDNP  180
CEPNMLPNLP RCDEGYPATN MNFHADMITD YQYKDYQILA SILVGGHVPT TESMSSLNLK  240
DGKGNDPITS VHEDGFHRED SSTTVSPLDC YFNSLKRKSN EDX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-72817213171NO APICAL MERISTEM PROTEIN
1ut4_B4e-72817213171NO APICAL MERISTEM PROTEIN
1ut7_A4e-72817213171NO APICAL MERISTEM PROTEIN
1ut7_B4e-72817213171NO APICAL MERISTEM PROTEIN
4dul_A4e-72817213171NAC domain-containing protein 19
4dul_B4e-72817213171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169387.10.0NAC transcription factor 47-like
RefseqXP_025671148.10.0NAC transcription factor 47
SwissprotK4BNG72e-79NAP2_SOLLC; NAC domain-containing protein 2
TrEMBLA0A444Y7V40.0A0A444Y7V4_ARAHY; Uncharacterized protein
STRINGXP_007150216.11e-153(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.14e-80NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Ma X, et al.
    The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato.
    Plant Physiol., 2018. 177(3): p. 1286-1302
    [PMID:29760199]