PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy008073
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 697aa    MW: 77476 Da    PI: 4.3634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59553158PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.23.4e-49251501127
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                lp GfrF+Ptdeelv++yL++k++g+  e+  vi+e+d++k+ePwdLp  + v++++ ew+fF+++d+ky++g+r nrat++gyWkatgk       +++
  Ahy008073  25 LPLGFRFRPTDEELVDFYLRQKINGNGDEV-WVIREIDVCKWEPWDLPdlSVVRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKXXXXS--GST 121
                699************************999.89**************96447777888********************************76654..699 PP

        NAM  99 lvglkktLvfykgrapkgektdWvmheyr 127
                ++g+kktLvfy+grapkg++t+Wvmheyr
  Ahy008073 122 VIGMKKTLVFYTGRAPKGKRTNWVMHEYR 150
                9***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-5719174IPR003441NAC domain
PROSITE profilePS5100553.84125174IPR003441NAC domain
PfamPF023655.3E-2726150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    Send to blast
MGAVEGFQQQ PLVVDAAPVL SLNSLPLGFR FRPTDEELVD FYLRQKINGN GDEVWVIREI  60
DVCKWEPWDL PDLSVVRNKD PEWFFFCPQD RKYPNGHRLN RATTHGYWKA TGKXXXXSGS  120
TVIGMKKTLV FYTGRAPKGK RTNWVMHEYR PTLQELDGTN PGQNPYVLCR LFKKQDESLE  180
GSNGEEMERT TSTNLTANYS PEEIQSDPAV KSVSSSQATE DDKKLAVIPL TPEEAISNVI  240
TPVGCQSDGC DAYDAQNQIA AGDPSKEEDL QVNMDIFYDP SELFDDKLFS PLHKHIPEEL  300
FHQSNNEANG HFGLQHQCGT NEISISDFFD SVINWDEISG DNSSGQTPNS AWFDVQHNES  360
WGNSNVDMVH ARPLQVGGAD YPGDATEGKL PLLKTREFNP NTSYDNAISN NMGLFQDHSQ  420
MAFSSDVNML QGYLATNNYE QPTNFNMAMA NSDNTGIRIR SRPPGYEGPN ANSNMQPQGT  480
APRRIRLARS LAPQHMSNEA AKDSSYESKD QNSQLTTARE METSKDLAAG ESVTVTSDVE  540
EQETSPVENK EFEDFNTVQQ STSSASSNLS TCSSDSEVSY EAEKESGWTS EDHSPKPAAA  600
GASKASEDQV PSECVNDITD DVDEPRIPNA YTLEVSKEES FSDSESKDSL LRRKVCYPSK  660
SSSNLAKWYS VIAISATLVV LLAFLVNTWG YGYYLKV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-412417819172NAC domain-containing protein 19
3swm_B2e-412417819172NAC domain-containing protein 19
3swm_C2e-412417819172NAC domain-containing protein 19
3swm_D2e-412417819172NAC domain-containing protein 19
3swp_A2e-412417819172NAC domain-containing protein 19
3swp_B2e-412417819172NAC domain-containing protein 19
3swp_C2e-412417819172NAC domain-containing protein 19
3swp_D2e-412417819172NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025609825.10.0protein NTM1-like 9 isoform X1
TrEMBLA0A444YAM60.0A0A444YAM6_ARAHY; Uncharacterized protein
STRINGGLYMA02G38710.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-89NAC transcription factor-like 9