PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy005578
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 183aa    MW: 20719.2 Da    PI: 7.5815
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-171a-Arachis_hypogaea-20917PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.22e-36461372102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k++e++ed+++++++sws+  nsfvv+d+++f++++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++ik
     Ahy005578  46 FLTKTFEVVEDPSTDSIVSWSRARNSFVVWDSHRFSTTILPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLAGQKHLLRTIK 133
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
     Ahy005578 134 RRRN 137
                   *987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004155.7E-6142135IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.101.5E-3842135IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.16E-3442135IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000563.9E-204669IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004473.8E-3246135IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.9E-208496IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS00434085109IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.9E-2097109IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MAGRMRVKEE EETVVLCGSG PGGSSSSSSV SPQPMEGLHD VGPPPFLTKT FEVVEDPSTD  60
SIVSWSRARN SFVVWDSHRF STTILPRYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG  120
FLAGQKHLLR TIKRRRNVTQ SSTKRSSTEK EEEGGSCVEL GEFGLEGEIE RLRRDRTVLM  180
AEI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B6e-284413527129Heat shock factor protein 1
5d5v_B6e-284413527129Heat shock factor protein 1
5d5v_D6e-284413527129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170175RLRRDR
Functional Description ? help Back to Top
Source Description
UniProtDNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020984618.11e-109heat stress transcription factor A-2 isoform X2
RefseqXP_025613414.11e-109heat stress transcription factor A-2 isoform X2
SwissprotP411523e-81HSF30_SOLPE; Heat shock factor protein HSF30
TrEMBLA0A151TTF02e-92A0A151TTF0_CAJCA; Heat stress transcription factor A-2
TrEMBLA0A445KVW43e-92A0A445KVW4_GLYSO; Heat shock factor protein HSF30 isoform A
TrEMBLI1JTX53e-92I1JTX5_SOYBN; Heat shock transcription factor HSFA2
STRINGGLYMA04G05500.54e-93(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.14e-67heat shock transcription factor A2
Publications ? help Back to Top
  1. Scharf KD,Rose S,Thierfelder J,Nover L
    Two cDNAs for tomato heat stress transcription factors.
    Plant Physiol., 1993. 102(4): p. 1355-6
    [PMID:8278556]