PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy002752
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family M-type_MADS
Protein Properties Length: 163aa    MW: 19053 Da    PI: 5.2362
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58471554PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-3300PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF47.91.7e-151148340
               --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
     SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
               i ++s r+ tf kR+ gilKK +ELS+LC++e++ ii 
  Ahy002752 11 IPDDSARKATFKKRKRGILKKVNELSILCGIEACAIIS 48
               77999*****************************9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006617.016147IPR002100Transcription factor, MADS-box
SMARTSM004328.2E-19161IPR002100Transcription factor, MADS-box
CDDcd002664.92E-25285No hitNo description
SuperFamilySSF554556.15E-22286IPR002100Transcription factor, MADS-box
PRINTSPR004043.3E-8323IPR002100Transcription factor, MADS-box
PfamPF003193.2E-151150IPR002100Transcription factor, MADS-box
PRINTSPR004043.3E-82338IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MTRKKVKLAY IPDDSARKAT FKKRKRGILK KVNELSILCG IEACAIISNP FESEEAEVWP  60
DPERAKEVIE KYSNSSVIDE SKNMNQESFM LQRIAKAKEL LKKKRKENRE KEMLLSMYKY  120
MKSDQELPDN MTVADLKQLD NLIDQSMKDI EIKMVLEDED DDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224RKKVKLAYIPDDSARKATFKKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016174292.11e-113agamous-like MADS-box protein AGL80
RefseqXP_025680200.11e-113agamous-like MADS-box protein AGL80
TrEMBLA0A444XIT51e-112A0A444XIT5_ARAHY; Uncharacterized protein
STRINGXP_004496032.11e-59(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.28e-29M-type_MADS family protein