PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_018868-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 290aa    MW: 32764.2 Da    PI: 9.044
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_018868-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.62.2e-083685154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +++ +++L
  AHYPO_018868-RA 36 RKVQKADREKLRRDRLNEQFLELGNALDPD----RPKNDKATILMDTIQLLREL 85
                     5677889********************997....79************999988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.4433585IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-1236105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.05E-63689No hitNo description
PfamPF000104.1E-63685IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-1136108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-54191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MDQWQSNKVC PPGGSQSSLL DSRQRPEEVK DPIAVRKVQK ADREKLRRDR LNEQFLELGN  60
ALDPDRPKND KATILMDTIQ LLRELNSEVN KLKAEYSSLS EESRELTQEK NELREEKASL  120
KSDIDSLNAQ YQQRLRVVFP WGAVEPSVVI APPYSYPLPV AVPPGPIPMQ PYPFFGSQNT  180
STIPTHPAYM YPTPPNPHVE QQPIQPASTN VLNKPDSQSK AFDSRKSRHH ERTEDSSDVA  240
TENLIEKASN HKKRKRLLST KGLQADFLPV KVLKRVPQIV LVVAHCCHL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010679934.11e-131PREDICTED: transcription factor bHLH121
SwissprotQ9LT231e-71BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0J8CBN71e-131A0A0J8CBN7_BETVU; Uncharacterized protein
STRINGSolyc01g111130.2.16e-86(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.23e-57bHLH family protein