PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_018100-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 346aa    MW: 37763.2 Da    PI: 10.3571
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_018100-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.12.4e-06313344639
                      HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-ST CS
              HLH   6 nerErrRRdriNsafeeLrellPk.askapskKls 39 
                      +++Er RR ri  ++ +L++l+P+ +   +++ ++
  AHYPO_018100-RA 313 SIAERERRTRISGKLKKLQDLVPNmD---KDPTNT 344
                      689*********************77...555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.093307345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-5310339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.18E-4311345No hitNo description
Gene3DG3DSA:4.10.280.105.0E-5312340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MYSSSSSSQQ QSSSNTQTNP NLMRYDSAPS SLFSHTVDSV IERGHHHQFF SEFTQSRLSS  60
SGGESSRNTL SLMHQQPYNE TDSSSKTTSS NLIRHSSSPA GFLTHLASDI GYEANYNEQG  120
TSNMMSRLGP QLSFTRKDHH SLSQISEVNE NNDHKRSANN SQHPTTSGFS LSTWDESNDN  180
NFFISNSSNK RGKAINDDIL NERNEIHGLG GLRSVGGGWS LSHGGGDGKV SVEGGGSGID  240
GRRGRGFKQH NGGARLLLVS GRYLLGENRP TDGSLVVSAA KRRRFNVGQP TVPQDSVPCK  300
IRAKRGFATH PRSIAERERR TRISGKLKKL QDLVPNMDKD PTNTK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010666766.13e-96PREDICTED: transcription factor bHLH128-like isoform X1
TrEMBLA0A0J8B3U23e-96A0A0J8B3U2_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.14e-25bHLH family protein