PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_015983-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 79aa    MW: 8998.46 Da    PI: 8.2136
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_015983-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.59.9e-082421255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     RR+riN+++  L++l+P +   +++ +  a +L   ++Y++sLq
  AHYPO_015983-RA  2 RRERINEKLKLLQDLVPGC---YKQTMGMAVMLDVIINYVQSLQ 42
                     9******************...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003530.0014147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.297141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-12254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.61E-8246No hitNo description
PfamPF000106.3E-5242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-11249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
VRRERINEKL KLLQDLVPGC YKQTMGMAVM LDVIINYVQS LQNQIERTIN PCDANLGRMM  60
REGYEGTTLP SVHSSWPF*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010681492.12e-29PREDICTED: transcription factor bHLH75
SwissprotA4D9983e-20BH075_ARATH; Transcription factor bHLH75
TrEMBLA0A067JZM33e-22A0A067JZM3_JATCU; Uncharacterized protein
STRINGXP_010681492.16e-29(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.11e-22bHLH family protein
Publications ? help Back to Top
  1. Khan M, et al.
    Interplay between phosphorylation and SUMOylation events determines CESTA protein fate in brassinosteroid signalling.
    Nat Commun, 2014. 5: p. 4687
    [PMID:25134617]
  2. Eremina M, et al.
    Brassinosteroids participate in the control of basal and acquired freezing tolerance of plants.
    Proc. Natl. Acad. Sci. U.S.A., 2016. 113(40): p. E5982-E5991
    [PMID:27655893]
  3. Pfannebecker KC,Lange M,Rupp O,Becker A
    Seed Plant-Specific Gene Lineages Involved in Carpel Development.
    Mol. Biol. Evol., 2017. 34(4): p. 925-942
    [PMID:28087776]