PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_015877-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 369aa    MW: 39799.8 Da    PI: 6.4319
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_015877-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.6e-052783161255
                      HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ ++++ L +l+ +      +K + a++L++A+ YI+ Lq
  AHYPO_015877-RA 278 RKEKLGERIAALHQLVSPF-----GKTDTASVLTEAIGYIQFLQ 316
                      6677889999999999998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.242266315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.24E-6276320No hitNo description
SuperFamilySSF474591.96E-9276320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-7280324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MDSTNFQHQH EHDQHHLQDH FVGCSSINLP SSGYVVSSSL DWNSSILPSS TNTTFSHKNE  60
QQDQSELTLL SSTTAIPKLE DDMLSSFPSF SGLIHNPGTA NNPLENINPW FNGLISSNGM  120
PYSRGLMQFP LEINNNNWSN NNNNGFPNST SFLNQMGLGV SSPNNSNAST VSSSSPRLGL  180
NLQAMDFLGN NNSSSFGAQT RPNMSYDVVG EEVISPAGKI LSNNNKNSSL MNGSITGTKR  240
AAAGNSTTDN QSKASSTNNS VATKKSSLKV SCPPFKVRKE KLGERIAALH QLVSPFGKTD  300
TASVLTEAIG YIQFLQDQIH GIGNDQGDGK NEAIRIDLQG RGLCLVPFSW TSYITLTQMD  360
ASNHPSYF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021718065.11e-148transcription factor bHLH110-like
STRINGXP_010679784.11e-132(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-28bHLH family protein