PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_015574-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 171aa    MW: 19652.6 Da    PI: 7.1433
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_015574-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-073351855
                     HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      +f  L  l+P++      K++Ka+iL  A++YIk+L+
  AHYPO_015574-RA  3 RGFLSLSALIPHL-----HKMDKASILSDATKYIKELE 35
                     57899*******8.....6****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.98E-5137No hitNo description
PROSITE profilePS5088811.172134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-10258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-5435IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-10544IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MTRGFLSLSA LIPHLHKMDK ASILSDATKY IKELEEQAKK LEEQSTIRIV ECAYLVNNIM  60
SNQQVLKHNN NNNNNNNNYN NNNNNVLEIE AKMLNHNILI RIHSLKKEGL IQKILEEIVN  120
LRLTTINCQT IPFGTYAIDV TITAQVSDDF DMTIKDLMKH LREVLQNYIF *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010683072.22e-51PREDICTED: transcription factor bHLH25-like
TrEMBLQ9ZSQ92e-47Q9ZSQ9_MESCR; Transporter homolog (Fragment)
STRINGXP_010683072.19e-51(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.18e-21bHLH family protein