PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_013681-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 274aa    MW: 31785.2 Da    PI: 7.1091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_013681-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24.1e-1089119335
                      HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TT CS
              HLH   3 rahnerErrRRdriNsafeeLrellPk.askaps 35 
                      ++h ++E+rRRdriN  +++Lr+l+Pk +   ++
  AHYPO_013681-RA  89 QSHRQAEKRRRDRINAQLSRLRRLIPKsD---KQ 119
                      79*************************55...33 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.34E-777119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.03686146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-989132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-789119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.46E-591121No hitNo description
CDDcd048734.86E-7179232No hitNo description
SuperFamilySSF550214.81E-5179223No hitNo description
Gene3DG3DSA:3.30.70.2604.5E-6179221No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MAKNSFYYPN MPEEESISHH FHATASKMHN FEDLPANYTD FEFQHPFDGF PEIDHDHNHN  60
HNHDHNYNHN HDHNYNSNTN PASASASSQS HRQAEKRRRD RINAQLSRLR RLIPKSDKQV  120
KELKRQTSEI SKLLIVPTES DDITIECQTN NIQQGDHHHH HHHDHHDDHS NDLMMIKATF  180
CCEDRPDLIP EIIKALKDLN LTIIGAEIAT LGGRLKSILL LYYKLDTNLH PDFNFSAIKN  240
SLMGVLTRLT SWPTSSNSNF RVTSKRQRFF FSS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021732497.11e-101transcription factor bHLH51-like
TrEMBLA0A0K9RUU52e-78A0A0K9RUU5_SPIOL; Uncharacterized protein
TrEMBLA0A0K9RWK71e-78A0A0K9RWK7_SPIOL; Uncharacterized protein
STRINGXP_010689462.19e-91(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.11e-33bHLH family protein