PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_010179-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 162aa    MW: 18315.6 Da    PI: 5.0366
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_010179-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH375.9e-122774455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
              HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                     +h+ +Er RR+ri +++  L++l+P++     +K   K++iL   ++Y++sLq
  AHYPO_010179-RA 27 SHSLAERVRRQRISDKMKVLQSLVPEC-----EKmTGKVQILDNIINYVHSLQ 74
                     8*************************9.....5669****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.33E-162190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.9162373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-162684IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.6E-92774IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.46E-102778No hitNo description
SMARTSM003533.8E-102979IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MTVHDEGGRR DDEYVYLRAK RGQTINSHSL AERVRRQRIS DKMKVLQSLV PECEKMTGKV  60
QILDNIINYV HSLQDHVKTL MEELALVDPT FNFNYLTERP VAIQTEESLA TSADSECSKI  120
ASQSYAGGYD QSICLHESSN AYMSAPLSPW LALLEDREYT I*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010682661.13e-58PREDICTED: transcription factor BEE 2-like
SwissprotQ9C6702e-28BH076_ARATH; Transcription factor bHLH76
TrEMBLA0A0J8C5L73e-58A0A0J8C5L7_BETVU; Uncharacterized protein
STRINGOB06G19820.12e-28(Oryza brachyantha)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26260.37e-30cryptochrome-interacting basic-helix-loop-helix 5