PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_010177-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 133aa    MW: 15426.8 Da    PI: 10.1904
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_010177-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.3e-114087455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
              HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                     +h+ +Er RR+ri +++  L++l+P +     +K   K++iL   ++Y++sLq
  AHYPO_010177-RA 40 SHSLAERVRRQRISDKMKVLQSLVPGC-----EKmTGKVQILDNIINYVHSLQ 87
                     8*************************9.....5669****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.45E-1634102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.0373686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-163997IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.1E-94087IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.89E-84091No hitNo description
SMARTSM003531.5E-94292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MNKNENINKG VERMTVHDED GRRDDEYVYL RAKRGQTINS HSLAERVRRQ RISDKMKVLQ  60
SLVPGCEKMT GKVQILDNII NYVHSLQDHV KNLTEKLALV DPTFNLNYLA HRPIAILMRN  120
HMLLRPILNA RE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010682661.14e-43PREDICTED: transcription factor BEE 2-like
SwissprotQ6NKN92e-30BH074_ARATH; Transcription factor bHLH74
TrEMBLA0A0J8C5L75e-43A0A0J8C5L7_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-31bHLH family protein