PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_008986-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 297aa    MW: 31311.7 Da    PI: 5.4523
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_008986-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-10174221455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  AHYPO_008986-RA 174 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 221
                      8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.29E-10168225No hitNo description
SuperFamilySSF474591.16E-17168237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-17170235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828170220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-8174221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10176226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MDPPLINEGS FTTANPSLSE IWPFSNGGNS ENGGMLGLRM GSGSGFVNGL IDGLLSNGLV  60
GTMNRDGSIE ESTVTEQSGS LGGGGGGCGG GRKRREIVSE DESSKLVSTT SSGNEMKDSN  120
AKRIKTSDSQ DENGSSKAAG EASSAGGNKS ADKPSEPPKD YIHVRARRGQ ATDSHSLAER  180
ARREKISERM KILQDLVPGC NKVIGKALVL DEIINYIQSL QRQVEFLSMK LEAVNSGMVP  240
SINGFQSKDV NHLGVPSFDP NGLIFNTQAT REFTAAGGPQ SEWLHMQLGG TFERTS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010678640.11e-171PREDICTED: transcription factor bHLH79
SwissprotQ9LV175e-80BH079_ARATH; Transcription factor bHLH79
TrEMBLA0A0J8F3X71e-171A0A0J8F3X7_BETVU; Uncharacterized protein
STRINGVIT_17s0000g05370.t011e-105(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.13e-72bHLH family protein