PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_008862-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 191aa    MW: 21922.9 Da    PI: 6.0092
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_008862-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.6e-1188128445
                      HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLe 45 
                      +hn+ Er RR++iN+ ++ Lr llP  +  +++  lsK++ L+
  AHYPO_008862-RA  88 NHNASERDRRKKINNMYSSLRALLPAiD--QRKLILSKISSLQ 128
                      8*************************88..56667****9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.04584137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.39E-785129No hitNo description
SuperFamilySSF474591.44E-985129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-1085130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-988129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MLAMSPLLSP NLGWDYPIEL ETNHVFDNFA LDNCTFIPDY SRLSQLVQNY QDNQDQSNDH  60
DQIKRSELPQ GTSSTNYCDN PILTKKFNHN ASERDRRKKI NNMYSSLRAL LPAIDQRKLI  120
LSKISSLQEN VGDLIKESKN VIIKETTSWC SISMSKVDDK EMVIQISATL ERIIISEVLL  180
LLQINGHFVI H
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021835244.15e-59transcription factor ORG2-like
RefseqXP_021835344.15e-59transcription factor bHLH101-like
STRINGXP_010673161.15e-56(Beta vulgaris)
STRINGXP_010673162.17e-56(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-18bHLH family protein