PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_007427-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 186aa    MW: 21003.7 Da    PI: 6.9221
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_007427-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-10246454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     +h ++Er+RR+++N+ ++ Lr+l+P++   +    + a+i+  A++++k+L
  AHYPO_007427-RA  2 THIAVERNRRKQMNEYLNMLRDLMPHS---Y---GDQASIVGAAINFVKEL 46
                     8*************************7...3...57888999999999988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.423146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-12160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.29E-9151No hitNo description
Gene3DG3DSA:4.10.280.105.4E-12263IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-7246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-8452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MTHIAVERNR RKQMNEYLNM LRDLMPHSYG DQASIVGAAI NFVKELEHNL QNLSANKQMK  60
ENINTKSTLL PFQDFFSFPQ FSSSNAQIIN DDPMMSGDAA MSHHHNNHRE QPSNGGLSGA  120
DVEVSMVETH AHLKIRLRRS LKHLSKLVSG LHCLRLVEDE SKLSSVDEIA RAVYELLGRI  180
QEENN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010694628.14e-69PREDICTED: transcription factor bHLH94-like
TrEMBLA0A0J8BBG74e-69A0A0J8BBG7_BETVU; Uncharacterized protein
STRINGPOPTR_0005s04160.12e-55(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-27bHLH family protein