PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_006651-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 111aa    MW: 12661 Da    PI: 4.6558
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_006651-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.81.7e-076388734
                     HHHHHHHHHHHHHHHHHHCTSCC.C...T CS
              HLH  7 erErrRRdriNsafeeLrellPk.askap 34
                       Er RR+++N++++ Lr ++P+     +
  AHYPO_006651-RA 63 VSERIRRQKLNDRLFALRAVVPNiT---K 88
                     67********************966...3 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-75290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508888.86156110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.17E-65994No hitNo description
Gene3DG3DSA:4.10.280.107.3E-66394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.6E-56388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MESFVDDYHP LYWETDFTTI YHLPTQDFNC LGFEDNLSCY YENDSSSADG NNGSSMASSK  60
NIVSERIRRQ KLNDRLFALR AVVPNITKAD EQDKDNLRIK IQRVISSAQS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019442675.12e-21PREDICTED: transcription factor bHLH35-like
RefseqXP_019442684.12e-21PREDICTED: transcription factor bHLH35-like
SwissprotQ2HIV93e-15BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A4P1RW323e-21A0A4P1RW32_LUPAN; Uncharacterized protein
STRINGXP_007138769.12e-19(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.15e-13bHLH family protein