PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_006213-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 244aa    MW: 27590.7 Da    PI: 8.7126
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_006213-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-1085136255
                      HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                      +  h e+Er+RR+++ +  + Lr+llP        +K s  + +++A++YIk+L+
  AHYPO_006213-RA  85 KIIHREVERQRRQEMSTLHSSLRSLLPMeY---IRGKRSICDHVTEATRYIKDLE 136
                      5669************************77...*******************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.15E-982140No hitNo description
SuperFamilySSF474592.62E-1283156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.68483135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-1086159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-786136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MFPFQSGELS FQVSNNLENN TNTNTNTNFL HQSYEHAQIP LNSNFKSPKT RKQRSNKISH  60
ENADCNNKGN GEDGICGNDV ISKKKIIHRE VERQRRQEMS TLHSSLRSLL PMEYIRGKRS  120
ICDHVTEATR YIKDLEKNVK DLGEKREKLK KSFSSLENQF IGNNLRDYNV GCSSSSSTTT  180
SISRSSSSTM SDYNVSVHKF TRTLQIEITA GVADEDPYPL SKTLHFLAQE GLDVVSCVSS  240
MVNQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010693647.14e-80PREDICTED: transcription factor bHLH120-like
RefseqXP_010693648.14e-80PREDICTED: transcription factor bHLH120-like
TrEMBLA0A0K9RR162e-85A0A0K9RR16_SPIOL; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12540.13e-26bHLH family protein