PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_006116-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 226aa    MW: 26099.7 Da    PI: 6.5108
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_006116-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.14.2e-1582133255
                      HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                      +  hn+ Er RR++iNs ++ Lr+llP  +   + kKls  ++++++ eYI +Lq
  AHYPO_006116-RA  82 KLDHNASERDRRKKINSMYASLRKLLPLiD---QRKKLSIPATVTRVLEYIPELQ 133
                      678*************************99...*******************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.01180132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-1281150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.51E-1381137No hitNo description
SuperFamilySSF474591.57E-1581152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-1282133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-1086138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MLAMSPFCPT LGWDYPLELE TNHVFDNFVL DSSFFPDFLP CQLTQDYQDN NQESNHDAKR  60
SESPQGTSSI DHSDHNPILA KKLDHNASER DRRKKINSMY ASLRKLLPLI DQRKKLSIPA  120
TVTRVLEYIP ELQKEVENLN HKKEVMYKKI SAQGNPRECM TTKETASYSI TINKVDEKEM  180
VIQISALEKI SISEVLLLLE KNGHFIFDVS CFLSFGGRTF YNVHLW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010673161.11e-100PREDICTED: transcription factor bHLH101-like
TrEMBLA0A0J8FH021e-100A0A0J8FH02_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-39bHLH family protein