PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_006115-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 257aa    MW: 29228.4 Da    PI: 5.3184
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_006115-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.8e-11136171440
                      HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STC CS
              HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskK.lsK 40 
                      +hn+ Er RR++iNs ++ Lr llP+ +   +++  lsK
  AHYPO_006115-RA 136 NHNASERERRKKINSMYASLRALLPTtN---QKELlLSK 171
                      8*************************44...44434666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.18E-8128165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.832132185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.82E-8133172No hitNo description
Gene3DG3DSA:4.10.280.102.1E-8133165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-8136172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MLAMSSPICP NLGWEYPLEL GTYQNFDTFD LDYVFLPNSC DSTQDYHVNQ SESPQSTSSR  60
GNTSSINHCD YLNRNELLQG NTGSIDHYDK VNRSESLQGN MSSIDHYDNI NRSESLPGNT  120
SSTDQFDDPK LVKKFNHNAS ERERRKKINS MYASLRALLP TTNQKELLLS KIGAFHEEKC  180
EINPIINKET LSNCLISTNK LGNQEMVIQI SAFERTSINE ALLFLEKNHH FVIDVNSFQS  240
FGGRTFYNIH LWETIP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021835344.11e-61transcription factor bHLH101-like
STRINGXP_010673162.13e-57(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41240.25e-17basic helix-loop-helix protein 100