PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_004632-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 241aa    MW: 26579 Da    PI: 8.4645
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_004632-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-1183130454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ + +L
  AHYPO_004632-RA  83 SKACREKARRDRLNDKFVELGSILEPG---RPPKTDKAAILVDAVRMVTQL 130
                      5678**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.59579130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-782135No hitNo description
Gene3DG3DSA:4.10.280.101.9E-1383153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-983130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1384156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-885136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd146860.00244145177No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MVSQENSNWV IDFNSYIDEL QIPTTDCNFS SPNFAFNNSH LQPPLNLPFN VSAEVEGNYG  60
DSEGPKNNSK KRGRSDSCGP SSSKACREKA RRDRLNDKFV ELGSILEPGR PPKTDKAAIL  120
VDAVRMVTQL RSEAQKLKDS NSSLQEKIKE LKTEKNELRD EKQRLKAEKE KLEQQLKTVN  180
TQPGFIPAPT AIPAAFAPPT QAPGGKLVPF MGYPGVAMWQ FMPPASVDTS QDHVLRPPVA  240
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010694263.11e-137PREDICTED: transcription factor ILR3
SwissprotQ9FH371e-106ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0K9QRB41e-151A0A0K9QRB4_SPIOL; Uncharacterized protein
STRINGVIT_19s0014g05100.t011e-109(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-79bHLH family protein