PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_003060-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 320aa    MW: 35461.3 Da    PI: 5.8945
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_003060-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH54.81.7e-174695255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eY+++Lq
  AHYPO_003060-RA 46 RSKHSETEQRRRSKINERFQILRDLIPPN----DQKRDKASLLLEVIEYVQYLQ 95
                     899*************************9....9*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.36E-1941108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.4E-2241108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.3844494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-154695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.26E-164699No hitNo description
SMARTSM003533.3E-1450100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MVRTIKPPHH QNHEEEYEDA EDVAAGTDTS SHREGKSAEQ KPNNYRSKHS ETEQRRRSKI  60
NERFQILRDL IPPNDQKRDK ASLLLEVIEY VQYLQEKVQV YEGSYQQVWS HEPTKLTPWR  120
ANHGLVDNIV NHSQAMKNGF LDENTAVQPM PSMQGSVESE LSGEFPYRAD HAVRPVNPVI  180
PLSIPLPSCA YPPGRGIQLI ENLAFQPHGS VDGAIIETED RPLERGSSSV SDVYSQELLK  240
RLTQSLQTSG VDLSHANISV QLDVGKQVHS GSNAIAPSVG VCSQDVDNQT PNNQPISHAV  300
EVSAKESIQA AKRLKTGES*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021736897.11e-162transcription factor BIM2-like
RefseqXP_021739378.11e-162transcription factor BIM2-like
TrEMBLA0A0K9R0G21e-158A0A0K9R0G2_SPIOL; Uncharacterized protein
STRINGXP_010694243.11e-144(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-57BES1-interacting Myc-like protein 2