PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_002586-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 350aa    MW: 39180.8 Da    PI: 5.9299
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_002586-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.8e-05150169120
                      CHHHHHHHHHHHHHHHHHHH CS
              HLH   1 rrrahnerErrRRdriNsaf 20 
                      +r++h ++Er+RR+++N+ +
  AHYPO_002586-RA 150 QRMTHIAVERNRRKQMNEYL 169
                      79***************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.28E-8148192No hitNo description
SuperFamilySSF474599.03E-10149209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MALDAVIFSQ DPLITPSFNY CPSNFGMSTY NEFANYYYYP SLLDDNNNNN NLKVPFNDGL  60
LEVNNNNNNV IPCNLFTPSE LMNIEWNQQS EHQQYVPLNL SSSPEENLYL SGQAQPPPRN  120
NLGAQTKTGV GPRRKSRRRN SKNKEEVEHQ RMTHIAVERN RRKQMNEYLA GDQASIVGGA  180
INYVKELEQL LQSMETRKIS KKDNQQPPPP PSPSEGDGGG EKRNAWPEIF NDFFSFPQYS  240
TRSKSEGNSV MNSCNRSVGD IEVTMVESHA NVKIMAKKQP KQLVKLIAGF QGLRLNVLHL  300
NVTTIDSFVL YSLSLKVEEG CQLSSVDDIA GAANHILGQI QEEAGDHLL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1150161RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010675612.11e-123PREDICTED: transcription factor bHLH94-like
TrEMBLA0A0J8FVW21e-122A0A0J8FVW2_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.19e-67bHLH family protein