PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_001473-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 253aa    MW: 28008.7 Da    PI: 6.308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_001473-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-1092144255
                      HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                      +  hn+ E+ RR ++N+ + +Lr+llP  +    +kK s   i  +A eY+ +Lq
  AHYPO_001473-RA  92 KLDHNAKEKVRRLKLNETYLTLRSLLPDsR--RAKKKWSAPYIIDRALEYVPQLQ 144
                      678*************************55..45566*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.07E-888148No hitNo description
Gene3DG3DSA:4.10.280.101.0E-1089160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.37390143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-1390157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-792144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-596149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MFLQDHDQDY ALIGQYDDPN IQETINWPIS PIEQVGPSKV VVEDSSLGYH DMQYYGPTTA  60
TAPAITTATA TTDDQTVAAV GGGVGEGSTS KKLDHNAKEK VRRLKLNETY LTLRSLLPDS  120
RRAKKKWSAP YIIDRALEYV PQLQAEIEKL TLEKNNMVSV LGKKQRQIDV GRDDHESNKV  180
NKTLTVSINE VKTGEVIVQI CEHNNKIGIL SNLIGKLEAQ GMQVLGASSQ HACEDRSCFH  240
LHIQVTSICF LY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010679419.13e-79PREDICTED: transcription factor bHLH101
TrEMBLA0A0K9RLF12e-87A0A0K9RLF1_SPIOL; Uncharacterized protein
STRINGVIT_12s0034g02150.t014e-48(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71200.18e-23bHLH family protein