PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_000421-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bHLH
Protein Properties Length: 263aa    MW: 28406.4 Da    PI: 6.2962
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_000421-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-10144191455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  AHYPO_000421-RA 144 SHSLAERARREKISERMRILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 191
                      8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.30E-10138195No hitNo description
SuperFamilySSF474598.77E-18138208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-18140208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.726140190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.9E-8144191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-10146196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MDPQSSLMNE TTSFNLSEIW PIQMNAGAGG AALDLRRSPF GPNSGWFVEP GSNLDVSGND  60
GGAARKRREN VEDGDSGQGG VCNGMSDSDG KRLKSTGSGD DSQNPKSSGV ENSGKGAEQK  120
SKQTTEPPKD YIHVRARRGQ ATDSHSLAER ARREKISERM RILQDLVPGC NKVIGKALVL  180
DEIINYIQSL QRQVEFLSMK LEAVNTRIPP GIEGFPSKDF GQQAFDSSGM GYGSQPPRDQ  240
YVRGSSPDWL HMQIGGGFDR QT*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010683313.11e-151PREDICTED: transcription factor bHLH79 isoform X1
SwissprotQ0JXE72e-66BPE_ARATH; Transcription factor BPE
TrEMBLA0A0K9RFZ01e-151A0A0K9RFZ0_SPIOL; Uncharacterized protein
STRINGPGSC0003DMT4000582044e-99(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-86BIG PETAL P