PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YZ7HA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 390aa    MW: 42606.8 Da    PI: 5.7981
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YZ7HAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.82.6e-29195253259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp+ +++t++g Hnh+
  Aradu.YZ7HA 195 SDVWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERDRSDPTKFIVTFTGVHNHP 253
                  79*************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-29183255IPR003657WRKY domain
PROSITE profilePS5081134.119189255IPR003657WRKY domain
SuperFamilySSF1182902.62E-25189255IPR003657WRKY domain
SMARTSM007741.2E-34194254IPR003657WRKY domain
PfamPF031065.5E-24196253IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
SYLSLSLSLS LSLKPYKKSA PSFVPFLTPT HLLQTLSLTL LFNMDDDWDL HAVVRGCATI  60
SSTSSTTTTT TSTTTTSYQP PPSSSCGFFN EQQSNVFSVS NNNPFELRSS IQELQHNHNL  120
CKPFFFKSQP FQSFQSSSSS SSPPNSALTQ HKQQQQNCNN GKNPHHAGSA TTPRSKRRKN  180
QLKNVCQVSA ENLSSDVWAW RKYGQKPIKG SPYPRGYYRC SSSKGCLARK QVERDRSDPT  240
KFIVTFTGVH NHPAPTHRNS LAGSSRQKLQ TPEIATTGDT EMVLTMKPVS ILASPSTSGV  300
EEEAETEATP AQKSESEEDN MEDYLMNDDD GGFEETEFGS PDMEITDDFF EGLDELTTAT  360
DGDSCFSTSV PNPSLPPFVA NSAATAAGGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A6e-171892551277Probable WRKY transcription factor 4
2lex_A6e-171892551277Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150425e-36AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015947783.10.0PREDICTED: WRKY transcription factor 22-like
TrEMBLI1MKR81e-106I1MKR8_SOYBN; Uncharacterized protein
STRINGGLYMA16G03570.11e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42053259
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.18e-64WRKY family protein