PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YH9QH
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 405aa    MW: 45093.1 Da    PI: 9.3012
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YH9QHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68.3e-31137196159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++prsYYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  Aradu.YH9QH 137 MNDGCQWRKYGQKIAKGNPCPRSYYRCTVSsSCPVRKQVQRCAQDMSILITTYEGTHNHP 196
                  58**************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-32122198IPR003657WRKY domain
SuperFamilySSF1182901.44E-27130198IPR003657WRKY domain
PROSITE profilePS5081129.218132198IPR003657WRKY domain
SMARTSM007745.5E-36137197IPR003657WRKY domain
PfamPF031062.5E-27138196IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MYMHQDTKIE STTEGGMGKL EVLLRNGAND EDSSSSSSSL VQKEYLFDII FQQQKQEATT  60
KEGINNNNED SDEELVSLSL GVSSSEKLLT EMWPPSKVLK TTKNNGEGNE ASHHHYHNTR  120
LKKARVSIRA RCDTQTMNDG CQWRKYGQKI AKGNPCPRSY YRCTVSSSCP VRKQVQRCAQ  180
DMSILITTYE GTHNHPLPSS ATPMASATSA AASVLRSSSL SSSSSQQGIV PNSETTTIVN  240
PNNNNNTTLI RPQQFYLFNS SMISTSNNNF HPTITLDLIT KPPTSSSSSI PKYSPTNLDF  300
SSTTTTFSPL QYSTQHSSSS RYYWNLNKNG KQPLIQYHQG HYPYQQNCMP IIFQKPLHAD  360
CYASSALNNN QQGNITKSLL TSQPSKGSYA SPPSKKSYQF LEKRK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-21124198174WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956798.10.0PREDICTED: probable WRKY transcription factor 72
SwissprotQ9LXG85e-57WRK72_ARATH; Probable WRKY transcription factor 72
TrEMBLA0A0B2P1012e-84A0A0B2P101_GLYSO; Putative WRKY transcription factor 72
TrEMBLI1J5L73e-84I1J5L7_SOYBN; Uncharacterized protein
STRINGGLYMA01G05050.17e-84(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.13e-46WRKY DNA-binding protein 72