PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YG73I
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 277aa    MW: 30678.9 Da    PI: 8.4487
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YG73IgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH292e-09139186455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aradu.YG73I 139 SHSLAERVRREKISERMKMLQRLVPGC----DKVTGKALVLDEIINYVQSLQ 186
                  8*************************9....555*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.58E-10133190No hitNo description
SuperFamilySSF474596.28E-17133200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.1E-17135196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.643135185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-6139186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.8E-10141191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
QLFQLHTSSL DTSSVDQSSK VVAATTKSYN SSADPSPPFL SHNHSPESSV VENGDQVTQN  60
TPPPINMADN KRKTTSNSSS FNNNKELSAG REGRSSKKQR KSNNGGSGVK KGEEKEKEEA  120
PTATGYIHVR ARRGQATDSH SLAERVRREK ISERMKMLQR LVPGCDKVTG KALVLDEIIN  180
YVQSLQNQVE FLSMKLASVS PFFFDFAMDL DNDNNNGHLV RPLDQRSSNV FSEYTGGQFW  240
EVEEDQRQKQ LLHPYGLGSN LGRGKLSLVS TMSEPES
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.YG73I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0312524e-79KT031252.1 Glycine max clone HN_CCL_23 bHLH transcription factor (Glyma04g37690.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015955662.11e-146transcription factor bHLH76
TrEMBLA0A445DTI81e-142A0A445DTI8_ARAHY; Uncharacterized protein
STRINGXP_007159982.11e-72(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41823358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-49bHLH family protein