PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Y4HIG
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GeBP
Protein Properties Length: 281aa    MW: 31533.8 Da    PI: 10.1019
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Y4HIGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57382.27.3e-2647143297
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkks..isfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  lfqr++seeDei +L+Gl +f aktgk+p++  d+fy+f+k+s  i ++vs  ql +KirrLKkKf+++  k k+gk  +  k+h+ ++++l k +Wg
  Aradu.Y4HIG  47 LFQRVFSEEDEIGILKGLSEFIAKTGKEPYKCADEFYDFMKGSnlIRANVSCMQLKDKIRRLKKKFENNLVKEKNGKG-TTLKPHELEALQLGKNVWG 143
                  79**************************************9755599*************************888887.6789**************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.5E-2448143IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MLKSQPSASV SQTKSGSKRA AENGIDHSEQ PKRVKKAQED AQKSKSLFQR VFSEEDEIGI  60
LKGLSEFIAK TGKEPYKCAD EFYDFMKGSN LIRANVSCMQ LKDKIRRLKK KFENNLVKEK  120
NGKGTTLKPH ELEALQLGKN VWGHDGRGGE AVLKETAKKD TVNNEKAAKK ALVPHSKGKA  180
EAKSKLNSEP LDSNEGRRMS EFSVTSLALT SMLRYDGTFG KPFGEDYIRK GIELLGVSKR  240
EDIEARWRKF KDAENRLYVE IAEFYAEQAK LIYQANSSSS S
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Y4HIG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015931774.10.0probable transcription factor At1g61730
TrEMBLA0A445C6H30.0A0A445C6H3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.14e-23DNA-binding storekeeper protein-related transcriptional regulator