PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.XD5SD
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TCP
Protein Properties Length: 180aa    MW: 19168.7 Da    PI: 9.9228
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.XD5SDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP45.13.6e-1415713895
          TCP 38 eLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95
                 eLG ++d++tieWLl+qa+p+i+++t+t ++++s++    s s+ +++ s ++ ++++a
  Aradu.XD5SD 15 ELGPKSDGQTIEWLLRQAEPSIIAATRTRTTPSSFSfV--SVSVRGGAGSLSSPSSTSA 71
                 8***************************9999966632..3333333233332222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS513698.783139IPR017887Transcription factor TCP subgroup
PfamPF036343.0E-101573IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MKEERKHSDS WHPTELGPKS DGQTIEWLLR QAEPSIIAAT RTRTTPSSFS FVSVSVRGGA  60
GSLSSPSSTS AASSLDHKPL LAPTPFILGK RIRTDDDASA KDDGVSVGSL VGPGAPAGLW  120
ALPARPDFDQ IWSFAAAAPL LEMVVQSAMV SVSHSNKLLC SFTIGISSSN KPWEKLRRRG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.XD5SD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020972772.13e-83transcription factor TCP7-like
SwissprotQ9FMX29e-38TCP7_ARATH; Transcription factor TCP7
TrEMBLA0A445A7952e-62A0A445A795_ARAHY; Uncharacterized protein
STRINGXP_007142764.18e-51(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54693153
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.14e-16TCP family protein