PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.WHT5K
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 157aa    MW: 16751.5 Da    PI: 4.6844
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.WHT5KgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY48.32e-152491359
                 E--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY 13 KevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                 K+ + s    +YYrC+s+ gCp++k+vers+ dp+ +++tY+ eHnh+
  Aradu.WHT5K  2 KDAQASAEVLGYYRCSSSkGCPARKQVERSRVDPTKLIVTYNYEHNHS 49
                 66677888899*****998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.934151IPR003657WRKY domain
SMARTSM007743.5E-10250IPR003657WRKY domain
PfamPF031063.1E-13248IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-15251IPR003657WRKY domain
SuperFamilySSF1182904.71E-121151IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MKDAQASAEV LGYYRCSSSK GCPARKQVER SRVDPTKLIV TYNYEHNHSL PSAAGFPPED  60
LTVFSSHVDL DLSGDSAVLL SHHNHHGFGW FDDVASAGGV LESPICGGVD DMALTAEEED  120
GEESLFAGLG ELPECSAVFR RRNIPSASAI QCGGIRG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016171815.11e-101PREDICTED: probable WRKY transcription factor 69
TrEMBLI1LUP56e-72I1LUP5_SOYBN; Uncharacterized protein
STRINGGLYMA12G33990.12e-71(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27703475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-27WRKY DNA-binding protein 65