PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.W9WVE
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 587aa    MW: 63589.7 Da    PI: 9.8754
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.W9WVEgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.53.9e-10313337226
      G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                  prl+Wtp+LH +Fv++v++LGG+e 
  Aradu.W9WVE 313 PRLCWTPNLHLSFVHVVQRLGGQES 337
                  8*********************984 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.5E-8309338IPR009057Homeodomain-like
SuperFamilySSF530982.02E-6388458IPR012337Ribonuclease H-like domain
PfamPF134566.6E-5484539No hitNo description
SuperFamilySSF530981.19E-5494544IPR012337Ribonuclease H-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    Send to blast
FGVFDGNVTA QLKKSVAPIG GKEIGGTDFW EREVLKSVAP IGDPLPHVAH AAGSRGGPPL  60
HHTARRHVHL TLTPSPSSNP HTHPSFCRTQ PRAINDLSHP TLAPSTQPSL DSEPSIGAAP  120
STHSVVSVSA CPPTPSVVSV SQTLVGFGTS IVAHSISQTL NRRSSLRGSA PVALPSPSLK  180
SSRRRLPLPH SSHLRQPCST FAVPCCGSAQ LLICGAHSLS LFFAESRLAE NTSRFFARLF  240
EVDCDFFLLY SLQGVPSLFS DLSSLYNQPG KADILEQLIL VFFFTALFKL SSTASREGKR  300
GSGVRQYVRS KMPRLCWTPN LHLSFVHVVQ RLGGQESNST LKHFDSSVLC LSSEYATIVV  360
LALVLEKLKP YGGLQESFES AKAISVGASK GVQRLGNQLL MVLQNTKIKL HLRLREGVGI  420
APCNAAEYRA VILGMRYALK KGFSFIRIQG DSKLVCMQGA RSEPISVQDI ALQSQALLNV  480
KDSNKELLSS ICRLREGVGI APCNAAEYRA MILGMRYALK KGFSFIRIQG DSKLVCMQVG  540
HLLCLHQLVY SVLMHTGYCC PTASTPLIAI QELRATIRVL QISLDVV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.W9WVE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351882e-45AC235188.1 Glycine max strain Williams 82 clone GM_WBb0010N12, complete sequence.
GenBankAC2353092e-45AC235309.1 Glycine max strain Williams 82 clone GM_WBb0069M12, complete sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1662323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-11G2-like family protein