PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.VSA8A
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 493aa    MW: 52561.8 Da    PI: 6.6462
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.VSA8AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.8e-30214272259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+H h+
  Aradu.VSA8A 214 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILVTTYEGTHSHP 272
                  7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-32198274IPR003657WRKY domain
SuperFamilySSF1182902.09E-27206274IPR003657WRKY domain
PROSITE profilePS5081128.897208274IPR003657WRKY domain
SMARTSM007742.4E-35213273IPR003657WRKY domain
PfamPF031066.1E-26215272IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MFPLLGFPVN LTRPADDHNN DDSNRKVVVD FFSDNRNKAQ EQQHVKPNIS VKKEIPHHDD  60
IPSSATTGLQ LLTANTGSDE STVDDGGVVS SDGEDKKAKA IEQQEQVDDE VVEGKVVVGG  120
EARQLLDVGN DQASDSSSDE RTRSSTPHAQ VGIRNNSNGK NEREDSPDSQ SQAWGPAPNK  180
LQKPNPTMDQ SSSEATMRKA RVSVRARSEA PMISDGCQWR KYGQKMAKGN PCPRAYYRCT  240
MAVGCPVRKQ VQRCAEDRTI LVTTYEGTHS HPLPPAAMAM ASTTTAAATM LLSGSMSSAD  300
GIMNPNLLAR AIFPSCSTST SSSMATLSAS APFPTVTLDL TQNPSSSNNT NNTSTPPIRH  360
HHPLNAVPLF QLPNFQGHPQ NFGTQALYNQ SKFSGLQLSQ QVAASSQLGI QASRPPLQHN  420
QPQQQPPSLA DSVTAAITTD PNFTAAIAAA ISSIIGGNNN NNQANSTADG NNNNSGSNPS  480
MSNRTTISSF SGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-21200276176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197481.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9C5191e-116WRKY6_ARATH; WRKY transcription factor 6
TrEMBLI1KZU81e-168I1KZU8_SOYBN; Uncharacterized protein
TrEMBLA0A0L9VEC01e-168A0A0L9VEC0_PHAAN; Uncharacterized protein
STRINGGLYMA09G00820.11e-168(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3034422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-69WRKY family protein