PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.VL3IZ
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 343aa    MW: 38034.5 Da    PI: 6.42
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.VL3IZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.9e-30132193159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp+++eitY+g+H+++
  Aradu.VL3IZ 132 LDDGYSWRKYGQKDILGATYPRGYYRCTHRnvqGCLATKQVQRSDEDPNMFEITYRGSHTCT 193
                  59***************************98999**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.686127195IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.6E-29129194IPR003657WRKY domain
SuperFamilySSF1182901.18E-26131194IPR003657WRKY domain
SMARTSM007745.4E-42132194IPR003657WRKY domain
PfamPF031061.6E-27133192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MEKMMMMGLG ETKKLREELV QGLELARQLQ IHLHVASTPH ETRDLLIQNI ISAFENALHI  60
LKWTPPPAAA VDPSISPAIR MSQESPPLSA GSEDSDRDLR DHDPNASKKR KSLPRWTKQI  120
RVGPGMGVEG PLDDGYSWRK YGQKDILGAT YPRGYYRCTH RNVQGCLATK QVQRSDEDPN  180
MFEITYRGSH TCTMASSSSN SASLPAPTTS PRNTNNNVLQ SLDQQPPMMN ELLLNLRAGL  240
RVQTENLDNC SSFNFPSNSN HVFSSQTPPP QPQPMLGDNN FPSYMSPATS GISQFSMTSG  300
NQINDMISAS NSNSPTVGLD FSFDQFDLDG HNNFTFGNPQ FFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-131321901772Probable WRKY transcription factor 4
2lex_A2e-131321901772Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015934427.10.0PREDICTED: probable WRKY transcription factor 53
TrEMBLI1KAM91e-131I1KAM9_SOYBN; Uncharacterized protein
STRINGGLYMA06G13090.11e-130(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-46WRKY family protein