PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.U1ZNR
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 128aa    MW: 13825.6 Da    PI: 8.186
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.U1ZNRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.57.3e-107796221
                 --SS-EEEEEEE--TT-SS- CS
         WRKY  2 dDgynWrKYGqKevkgsefp 21
                 +D ++WrKYGqK++kgs++p
  Aradu.U1ZNR 77 SDSWAWRKYGQKPIKGSPYP 96
                 69*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-96896IPR003657WRKY domain
SuperFamilySSF1182901.44E-77297IPR003657WRKY domain
SMARTSM007740.00376121IPR003657WRKY domain
PROSITE profilePS5081111.4637796IPR003657WRKY domain
PfamPF031061.3E-57897IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MYRRINTRPL YVADIEDQEN EPEPASEAGP ASPSSGDDTK FEAPSPKKRR EMKKRVVTIP  60
IGDVDGSKSK GESYPPSDSW AWRKYGQKPI KGSPYPSVAA VVGGAGEEKH FVQAAELKCA  120
MCGVVVGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753514e-74EU375351.1 Glycine max transcription factor (WRKY16) mRNA, complete cds.
GenBankEU0195874e-74EU019587.1 Glycine max WRKY52 (WRKY52) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936441.17e-64PREDICTED: probable WRKY transcription factor 69
SwissprotQ93WV51e-31WRK69_ARATH; Probable WRKY transcription factor 69
TrEMBLA0A0B2RWX61e-48A0A0B2RWX6_GLYSO; Putative WRKY transcription factor 69
TrEMBLI1LUP53e-47I1LUP5_SOYBN; Uncharacterized protein
TrEMBLA7LHI83e-47A7LHI8_SOYBN; WRKY52
TrEMBLI1M3K33e-47I1M3K3_SOYBN; Uncharacterized protein
TrEMBLB0LUS03e-47B0LUS0_SOYBN; Transcription factor
STRINGGLYMA12G33990.17e-47(Glycine max)
STRINGGLYMA13G36540.19e-47(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27703475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-28WRKY DNA-binding protein 69