PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.U18LA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 290aa    MW: 33544.9 Da    PI: 10.1083
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.U18LAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.62.5e-169104276
     trihelix   2 WtkqevlaLiearr.emeerlrrgk....................lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                  Wt qe+l Li+a++ ++e+rl++++                    + + +W++v ++++++g+ rs++qC++kw+nl ++ykk+++ e+k +s++s
  Aradu.U18LA   9 WTIQETLILITAKKlDDERRLKTASsssssssaspacsttptsrsSGELRWKWVENYCWSHGCLRSQNQCNDKWDNLLRDYKKVRDYESKSQSQQS 104
                  *************9544444554435566777888888888888899******************************************9876665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.319186IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.605.7E-5587IPR009057Homeodomain-like
PfamPF138371.8E-118108No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MIEYRKGNWT IQETLILITA KKLDDERRLK TASSSSSSSS ASPACSTTPT SRSSGELRWK  60
WVENYCWSHG CLRSQNQCND KWDNLLRDYK KVRDYESKSQ SQQSNYDDNK DLLPSYWTLN  120
KQQRKEHNLP SNMVFEVYQA ICEVLQRKQT QTQPQRITAA TPTTPITTIT TPQQQTQPQP  180
ITIGGQNHHQ EQKKIVIMMM MDPKRRKVKN LGSSIMHSAS VLARALRSCE EKKEKRHREM  240
MELEQRRIQM EEARNEVQRQ GIATIVAAVT NLSGAIQSLI NNNPERHGQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.U18LA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229739.11e-129trihelix transcription factor GTL1
TrEMBLA0A151SE871e-127A0A151SE87_CAJCA; Uncharacterized protein
STRINGXP_007143775.11e-115(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68043242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.18e-43Trihelix family protein